Phenobarbital
Everything that changed this flow. Back to the flow
fe0acd60-3ddc-11dd-9f87-0050c2490048
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'NSC 128143' (registry code), 'NSC 9848' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=phenobarbital||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'50-06-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-33c3463c99580f59: {'50-06-6': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['50-06-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8069']; candidate_pubchem_cids=[4763]; selected_pubchem_cids=[4763]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 22,646 | bootstrap_labels | prefLabel | — | [{"@value":"phenobarbital","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Bootstrapped prefLabel from legacy name field |
| 22,647 | bootstrap_labels | name | phenobarbital | — | Purged legacy name field to enforce prefLabel usage |
| 22,648 | bootstrap_labels | synonyms | ["2,4,6(1H,3H,5H)-Pyrimidinetrione, 5-ethyl-5-phenyl-","5-Ethyl-5-phenyl-2,4,6(1H,3H,5H)-pyrimidinetrione","5-Ethyl-5-p… | [] | Removed legacy synonyms field in favor of structured labels |
| 203,004 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 203,005 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 220,515 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,182 | normalize_name_case | prefLabel | [{"@value":"phenobarbital","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | [{"@value":"Phenobarbital","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 247,564 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12N2O3… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 247,565 | enrich_references | skos_definition | — | [{"@value":"A member of the class of barbiturates, the structure of which is that of barbituric acid substituted at C-5… | Merged ChEBI/PubChem definitions into skos:definition |
| 247,566 | enrich_references | references | [] | [{"@id":"drugcentral:2134","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['50-06-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8069']; candidate_pubchem_cids=[4763]; selected_pubchem_cids=[4763]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 254,197 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12N2O3… | rdkit_pre_consensus from 'CCC1(C(=O)NC(=O)NC1=O)C2=CC=CC=C2'; added: monoisotopic_mass |
| 257,234 | chebi_altlabels | altLabel | [] | [{"@value":"5-Ethyl-5-phenyl-pyrimidine-2,4,6-trione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | Added 15 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 270,594 | consensus_match | altLabel | [{"@value":"5-Ethyl-5-phenyl-pyrimidine-2,4,6-trione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | [{"@value":"5-Ethyl-5-phenyl-pyrimidine-2,4,6-trione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | group_key=phenobarbital||dimension=Environmental > media=Water > water_body=Ocean; cas=50-06-6; added Common Chemistry CAS names as altLabel: 2,4,6(1<em>H</em>,3<em>H</em>,5<em>H</em>)-Pyrimidinetrione, 5-ethyl-5-phenyl-, 5-Ethyl-5-phenyl-1,3-diazinane-2,4,6-trione, Adonal, Agrypnal, Amylofene, Barbenyl, Barbiphenyl, Barbipil, Barbita, Barbituric acid, 5-ethyl-5-phenyl-, Barbivis, Blu-phen, Cratecil, Dormiral, Doscalun, Duneryl, Eskabarb, Etilfen, Euneryl, Fenemal, Fenemal recip, Gardenal, Gardepanyl, Hysteps, Lepinal, Lepinaletten, Liquital, Lixophen, Lubergal, Luminalum, MeSH ID: D010634, NSC 128143, NSC 9848, Neurobarb, Noptil, Nunol, Phenaemal, Phenemal, Phenobar, Phenoluric, Phenonyl, Phenyral, Phob, Sedonal, Sedophen, Sevenal, Solfoton, Somonal, Stental Extentabs, Talpheno, Teolaxin, Triphenatol, Versomnal; object_uuid=fo-33c3463c99580f59 |
| 270,595 | consensus_match | cas_match_labels | — | {"50-06-6":"exactMatch"} | group_key=phenobarbital||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'50-06-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-33c3463c99580f59: {'50-06-6': 'exactMatch'} |
| 279,413 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12N2O3… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '5-Ethyl-5-phenyl-pyrimidine-2,4,6-trione' |
| 286,289 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12N2O3… | rdkit_post_consensus from 'CCC1(c2ccccc2)C(=O)NC(=O)NC1=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,644 | strip_catalogue_altlabels | altLabel | [{"@value":"5-Ethyl-5-phenyl-pyrimidine-2,4,6-trione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | [{"@value":"5-Ethyl-5-phenyl-pyrimidine-2,4,6-trione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | Removed 2 catalogue altLabel value(s): 'NSC 128143' (registry code), 'NSC 9848' (registry code) |
| 382,536 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… | associations resolved on the elementary layer |
| 393,806 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12N2O3… | typed the way the ontology types it |
| 402,995 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/22646 | prefLabel | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v0 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v1 |
| ef:activity/change/20260821T1554374006150000/22647 | name | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v1 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v2 |
| ef:activity/change/20260821T1554374006150000/22648 | synonyms | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v2 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v3 |
| ef:activity/change/20260821T1554374006150000/203004 | context | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v3 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v4 |
| ef:activity/change/20260821T1554374006150000/203005 | context_iri | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v4 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v5 |
| ef:activity/change/20260821T1554374006150000/220515 | unit_iri | ef:agent/unit_normalization | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v5 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v6 |
| ef:activity/change/20260821T1554374006150000/226182 | prefLabel | ef:agent/normalize_name_case | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v6 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v7 |
| ef:activity/change/20260821T1554374006150000/247564 | properties | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v7 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v8 |
| ef:activity/change/20260821T1554374006150000/247565 | skos_definition | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v8 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v9 |
| ef:activity/change/20260821T1554374006150000/247566 | references | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v9 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v10 |
| ef:activity/change/20260821T1554374006150000/254197 | properties | ef:agent/rdkit_pre_consensus | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v10 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v11 |
| ef:activity/change/20260821T1554374006150000/257234 | altLabel | ef:agent/chebi_altlabels | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v11 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v12 |
| ef:activity/change/20260821T1554374006150000/270594 | altLabel | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v12 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v13 |
| ef:activity/change/20260821T1554374006150000/270595 | cas_match_labels | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v13 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v14 |
| ef:activity/change/20260821T1554374006150000/279413 | properties | ef:agent/opsin_iupac | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v14 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v15 |
| ef:activity/change/20260821T1554374006150000/286289 | properties | ef:agent/rdkit_post_consensus | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v15 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v16 |
| ef:activity/change/20260821T1554374006150000/291644 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v16 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v17 |
| ef:activity/change/20260821T1554374006150000/382536 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v17 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v18 |
| ef:activity/change/20260821T1554374006150000/393806 | properties | ef:agent/normalise_property_values | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v18 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v19 |
| ef:activity/change/20260821T1554374006150000/402995 | types | ef:agent/link_flows_to_their_substance | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v19 | ef:flow/fe0acd60-3ddc-11dd-9f87-0050c2490048/v20 |