Cyclophosphamide
Everything that changed this flow. Back to the flow
fe0acd60-3ddc-11dd-9fb1-0050c2490048
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 4 catalogue altLabel value(s): 'B 518' (grade code), 'CB 4564' (grade code), 'NSC 26271' (registry code), 'SK 20501' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=cyclophosphamide||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'50-18-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7232afdb1a39d805: {'50-18-0': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['50-18-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_4027']; candidate_pubchem_cids=[2907, 53486060, 131801284]; selected_pubchem_cids=[2907]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 8,858 | bootstrap_labels | prefLabel | — | [{"@value":"cyclophosphamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Bootstrapped prefLabel from legacy name field |
| 8,859 | bootstrap_labels | name | cyclophosphamide | — | Purged legacy name field to enforce prefLabel usage |
| 8,860 | bootstrap_labels | synonyms | ["(+-)-Cyclophosphamide","(+-)-N,N-Bis(2-chloroethyl)tetrahydro-2H-1,3,2-oxazaphosphorin-2-amine 2-oxide","(-)-Cyclopho… | [] | Removed legacy synonyms field in favor of structured labels |
| 203,088 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 203,089 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 216,287 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,182 | normalize_name_case | prefLabel | [{"@value":"cyclophosphamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | [{"@value":"Cyclophosphamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 235,655 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H15Cl2N2… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 235,656 | enrich_references | skos_definition | — | [{"@value":"A phosphorodiamide that is 1,3,2-oxazaphosphinan-2-amine 2-oxide substituted by two 2-chloroethyl groups at… | Merged ChEBI/PubChem definitions into skos:definition |
| 235,657 | enrich_references | references | [] | [{"@id":"drugcentral:758","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… | Added references with provenance; cas_numbers=['50-18-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_4027']; candidate_pubchem_cids=[2907, 53486060, 131801284]; selected_pubchem_cids=[2907]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 255,644 | chebi_altlabels | altLabel | [] | [{"@value":"(+-)-Cyclophosphamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 265,478 | consensus_match | altLabel | [{"@value":"(+-)-Cyclophosphamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | [{"@value":"(+-)-Cyclophosphamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | group_key=cyclophosphamide||dimension=Environmental > media=Water > water_body=Ocean; cas=50-18-0; added Common Chemistry CAS names as altLabel: (±)-Cyclophosphamide, 2-[Bis(2-chloroethyl)amino]tetrahydro-2<em>H</em>-1,3,2-oxazaphosphorin 2-oxide, 2<em>H</em>-1,3,2-Oxazaphosphorin-2-amine, <em>N</em>,<em>N</em>-bis(2-chloroethyl)tetrahydro-, 2-oxide, 2<em>H</em>-1,3,2-Oxazaphosphorine, 2-[bis(2-chloroethyl)amino]tetrahydro-, 2-oxide, <em>N</em>,<em>N</em>-Bis(2-chloroethyl)-<em>N</em>′,<em>O</em>-propylenephosphoric acid ester diamide, <em>N</em>,<em>N</em>-Bis(β-chloroethyl)-<em>N</em>′,<em>O</em>-trimethylenephosphoric acid ester diamide, Asta B 518, B 518, CB 4564, CP, CPA, CTX, CY, Clafen, Claphene, Cycloblastin, Cyclocel, Cyclophosphamid, Cyclophosphamidum, Cyclophosphan, Cyclophosphane, Cyclostin, Cycloxan, Cycrame, Cydoxan, Cyphos, Cytophosphan, Cytophosphane, Cytoxan, Eldamide, Endoxan, Endoxan R, Endoxan-Asta, Endoxana, Endoxanal, Endoxane, Enduxan, Genoxal, Hexadrin, Ledoxan, MeSH ID: D003520, Mitoxan, NCI C04900, NSC 26271, Neophos, Neosar, Neosar (antineoplastic), Oncomide, Procytox, Revimmune, SK 20501, Semdoxan, Sendoxan, Senduxan, Zyklophosphamid; object_uuid=fo-7232afdb1a39d805 |
| 265,479 | consensus_match | cas_match_labels | — | {"50-18-0":"exactMatch"} | group_key=cyclophosphamide||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'50-18-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7232afdb1a39d805: {'50-18-0': 'exactMatch'} |
| 275,926 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H15Cl2N2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H15Cl2N2… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'N,N-bis(2-chloroethyl)-1,3,2-oxazaphosphinan-2-amine 2-oxide' |
| 282,495 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H15Cl2N2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H15Cl2N2… | rdkit_post_consensus from 'O=P1(N(CCCl)CCCl)NCCCO1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,102 | strip_catalogue_altlabels | altLabel | [{"@value":"(+-)-Cyclophosphamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | [{"@value":"(+-)-Cyclophosphamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | Removed 4 catalogue altLabel value(s): 'B 518' (grade code), 'CB 4564' (grade code), 'NSC 26271' (registry code), 'SK 20501' (grade code) |
| 382,578 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… | associations resolved on the elementary layer |
| 390,274 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H15Cl2N2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H15Cl2N2… | typed the way the ontology types it |
| 397,811 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 397,812 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/8858 | prefLabel | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v0 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v1 |
| ef:activity/change/20260822T0600486828500000/8859 | name | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v1 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v2 |
| ef:activity/change/20260822T0600486828500000/8860 | synonyms | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v2 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v3 |
| ef:activity/change/20260822T0600486828500000/203088 | context | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v3 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v4 |
| ef:activity/change/20260822T0600486828500000/203089 | context_iri | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v4 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v5 |
| ef:activity/change/20260822T0600486828500000/216287 | unit_iri | ef:agent/unit_normalization | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v5 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v6 |
| ef:activity/change/20260822T0600486828500000/223182 | prefLabel | ef:agent/normalize_name_case | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v6 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v7 |
| ef:activity/change/20260822T0600486828500000/235655 | properties | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v7 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v8 |
| ef:activity/change/20260822T0600486828500000/235656 | skos_definition | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v8 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v9 |
| ef:activity/change/20260822T0600486828500000/235657 | references | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v9 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v10 |
| ef:activity/change/20260822T0600486828500000/255644 | altLabel | ef:agent/chebi_altlabels | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v10 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v11 |
| ef:activity/change/20260822T0600486828500000/265478 | altLabel | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v11 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v12 |
| ef:activity/change/20260822T0600486828500000/265479 | cas_match_labels | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v12 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v13 |
| ef:activity/change/20260822T0600486828500000/275926 | properties | ef:agent/opsin_iupac | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v13 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v14 |
| ef:activity/change/20260822T0600486828500000/282495 | properties | ef:agent/rdkit_post_consensus | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v14 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v15 |
| ef:activity/change/20260822T0600486828500000/289102 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v15 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v16 |
| ef:activity/change/20260822T0600486828500000/382578 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v16 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v17 |
| ef:activity/change/20260822T0600486828500000/390274 | properties | ef:agent/normalise_property_values | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v17 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v18 |
| ef:activity/change/20260822T0600486828500000/397811 | types | ef:agent/link_flows_to_their_substance | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v18 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v19 |
| ef:activity/change/20260822T0600486828500000/397812 | roles | ef:agent/link_flows_to_their_substance | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v19 | ef:flow/fe0acd60-3ddc-11dd-9fb1-0050c2490048/v20 |