Phenanthrene
Everything that changed this flow. Back to the flow
fe0acd60-3ddc-11dd-9fd5-0050c2490048
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 26256' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=phenanthrene||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'85-01-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1f63b7456251f220: {'85-01-8': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['85-01-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28851']; candidate_pubchem_cids=[995]; selected_pubchem_cids=[995]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 25,458 | bootstrap_labels | prefLabel | — | [{"@value":"phenanthrene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | Bootstrapped prefLabel from legacy name field |
| 25,459 | bootstrap_labels | name | phenanthrene | — | Purged legacy name field to enforce prefLabel usage |
| 25,533 | bootstrap_labels | synonyms | ["9,10-Dehydrophenanthrene","AC-11346","AC1L1AHW","AC1Q1HLB","Coal tar pitch volatiles: phenanthrene","I14-0890","P0079… | [] | Removed legacy synonyms field in favor of structured labels |
| 203,160 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 203,161 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 221,005 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,595 | normalize_name_case | prefLabel | [{"@value":"phenanthrene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | [{"@value":"Phenanthrene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 248,220 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H10"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 248,221 | enrich_references | skos_definition | — | [{"@value":"A polycyclic aromatic hydrocarbon composed of three fused benzene rings which takes its name from the two t… | Merged ChEBI/PubChem definitions into skos:definition |
| 248,222 | enrich_references | references | [] | [{"@id":"gmelin:28699","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… | Added references with provenance; cas_numbers=['85-01-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28851']; candidate_pubchem_cids=[995]; selected_pubchem_cids=[995]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 257,387 | chebi_altlabels | altLabel | [] | [{"@value":"Phenanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… | Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 270,572 | consensus_match | altLabel | [{"@value":"Phenanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… | [{"@value":"Phenanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… | group_key=phenanthrene||dimension=Environmental > media=Air > indoor=Unknown; cas=85-01-8; added Common Chemistry CAS names as altLabel: NSC 26256, Ravatite, [3]Helicene; object_uuid=fo-1f63b7456251f220 |
| 270,573 | consensus_match | cas_match_labels | — | {"85-01-8":"exactMatch"} | group_key=phenanthrene||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'85-01-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1f63b7456251f220: {'85-01-8': 'exactMatch'} |
| 279,722 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H10"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H10"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Phenanthrene' |
| 286,616 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H10"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H10"],"… | rdkit_post_consensus from 'c1ccc2c(c1)ccc1ccccc12'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,839 | strip_catalogue_altlabels | altLabel | [{"@value":"Phenanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… | [{"@value":"Phenanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… | Removed 1 catalogue altLabel value(s): 'NSC 26256' (registry code) |
| 382,614 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… | associations resolved on the elementary layer |
| 394,129 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H10"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H10"],"… | typed the way the ontology types it |
| 403,643 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 403,644 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/25458 | prefLabel | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v0 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v1 |
| ef:activity/change/20260821T1554374006150000/25459 | name | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v1 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v2 |
| ef:activity/change/20260821T1554374006150000/25533 | synonyms | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v2 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v3 |
| ef:activity/change/20260821T1554374006150000/203160 | context | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v3 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v4 |
| ef:activity/change/20260821T1554374006150000/203161 | context_iri | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v4 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v5 |
| ef:activity/change/20260821T1554374006150000/221005 | unit_iri | ef:agent/unit_normalization | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v5 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v6 |
| ef:activity/change/20260821T1554374006150000/226595 | prefLabel | ef:agent/normalize_name_case | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v6 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v7 |
| ef:activity/change/20260821T1554374006150000/248220 | properties | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v7 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v8 |
| ef:activity/change/20260821T1554374006150000/248221 | skos_definition | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v8 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v9 |
| ef:activity/change/20260821T1554374006150000/248222 | references | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v9 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v10 |
| ef:activity/change/20260821T1554374006150000/257387 | altLabel | ef:agent/chebi_altlabels | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v10 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v11 |
| ef:activity/change/20260821T1554374006150000/270572 | altLabel | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v11 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v12 |
| ef:activity/change/20260821T1554374006150000/270573 | cas_match_labels | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v12 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v13 |
| ef:activity/change/20260821T1554374006150000/279722 | properties | ef:agent/opsin_iupac | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v13 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v14 |
| ef:activity/change/20260821T1554374006150000/286616 | properties | ef:agent/rdkit_post_consensus | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v14 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v15 |
| ef:activity/change/20260821T1554374006150000/291839 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v15 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v16 |
| ef:activity/change/20260821T1554374006150000/382614 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v16 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v17 |
| ef:activity/change/20260821T1554374006150000/394129 | properties | ef:agent/normalise_property_values | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v17 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v18 |
| ef:activity/change/20260821T1554374006150000/403643 | types | ef:agent/link_flows_to_their_substance | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v18 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v19 |
| ef:activity/change/20260821T1554374006150000/403644 | roles | ef:agent/link_flows_to_their_substance | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v19 | ef:flow/fe0acd60-3ddc-11dd-9fd5-0050c2490048/v20 |