Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 1548' (registry code), 'Preventol 3041' (trade name)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=o-phenylphenol||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'90-43-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f6013ddbd2ed9b04: {'90-43-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['90-43-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17043']; candidate_pubchem_cids=[7017, 8396, 5991893, 18704376]; selected_pubchem_cids=[7017]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
22,708 bootstrap_labels prefLabel [{"@value":"o-phenylphenol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… Bootstrapped prefLabel from legacy name field
22,709 bootstrap_labels name o-phenylphenol Purged legacy name field to enforce prefLabel usage
22,710 bootstrap_labels synonyms ["'Dowicide A'","(1,1'-Biphenyl)-2-ol","(1,1'-Biphenyl)-2-ol, chlorinated","(1,1-Biphenyl)-2-ol","1,1'-Biphenyl-2-ol","… [] Removed legacy synonyms field in favor of structured labels
203,388 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
203,389 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
220,540 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,196 normalize_name_case prefLabel [{"@value":"o-phenylphenol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… [{"@value":"O-phenylphenol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
247,623 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
247,624 enrich_references skos_definition [{"@value":"A member of the class of hydroxybiphenyls that is biphenyl substituted by a hydroxy group at position 2. It… Merged ChEBI/PubChem definitions into skos:definition
247,625 enrich_references references [] [{"@id":"drugcentral:4768","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['90-43-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17043']; candidate_pubchem_cids=[7017, 8396, 5991893, 18704376]; selected_pubchem_cids=[7017]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,221 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… rdkit_pre_consensus from 'C1=CC=C(C=C1)C2=CC=CC=C2O'; added: monoisotopic_mass
257,255 chebi_altlabels altLabel [] [{"@value":"2-Biphenylol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,094 consensus_match altLabel [{"@value":"2-Biphenylol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… [{"@value":"2-Biphenylol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… group_key=o-phenylphenol||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); cas=90-43-7; added Common Chemistry CAS names as altLabel: 2-Hydroxy-1,1′-biphenyl, 2-Hydroxydiphenyl, <em>o</em>-Biphenylol, <em>o</em>-Xenol, Anthrapole 73, Britewood S, Decco OPP 20, Dowicide 1, Invalon OP, NSC 1548, Nectryl, O-PP, Preventol 3041, Preventol O extra, Remol TRF, Tetrosin OE, Tetrosin OE-N, Tumescal OPE, [1,1′-Biphenyl]-2-ol; object_uuid=fo-f6013ddbd2ed9b04
270,095 consensus_match cas_match_labels {"90-43-7":"exactMatch"} group_key=o-phenylphenol||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'90-43-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f6013ddbd2ed9b04: {'90-43-7': 'exactMatch'}
279,451 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-Biphenylol'
286,329 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… rdkit_post_consensus from 'Oc1ccccc1-c1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,684 strip_catalogue_altlabels altLabel [{"@value":"2-Biphenylol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… [{"@value":"2-Biphenylol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… Removed 2 catalogue altLabel value(s): 'NSC 1548' (registry code), 'Preventol 3041' (trade name)
382,748 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… associations resolved on the elementary layer
393,848 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… typed the way the ontology types it
403,040 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
403,041 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/22708 prefLabel ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v0 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v1
ef:activity/change/20260820T0738569779880000/22709 name ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v1 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v2
ef:activity/change/20260820T0738569779880000/22710 synonyms ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v2 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v3
ef:activity/change/20260820T0738569779880000/203388 context ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v3 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v4
ef:activity/change/20260820T0738569779880000/203389 context_iri ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v4 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v5
ef:activity/change/20260820T0738569779880000/220540 unit_iri ef:agent/unit_normalization ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v5 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v6
ef:activity/change/20260820T0738569779880000/226196 prefLabel ef:agent/normalize_name_case ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v6 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v7
ef:activity/change/20260820T0738569779880000/247623 properties ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v7 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v8
ef:activity/change/20260820T0738569779880000/247624 skos_definition ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v8 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v9
ef:activity/change/20260820T0738569779880000/247625 references ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v9 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v10
ef:activity/change/20260820T0738569779880000/254221 properties ef:agent/rdkit_pre_consensus ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v10 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v11
ef:activity/change/20260820T0738569779880000/257255 altLabel ef:agent/chebi_altlabels ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v11 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v12
ef:activity/change/20260820T0738569779880000/270094 altLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v12 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v13
ef:activity/change/20260820T0738569779880000/270095 cas_match_labels ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v13 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v14
ef:activity/change/20260820T0738569779880000/279451 properties ef:agent/opsin_iupac ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v14 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v15
ef:activity/change/20260820T0738569779880000/286329 properties ef:agent/rdkit_post_consensus ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v15 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v16
ef:activity/change/20260820T0738569779880000/291684 altLabel ef:agent/strip_catalogue_altlabels ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v16 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v17
ef:activity/change/20260820T0738569779880000/382748 concept_associations ef:agent/carry_associations_onto_flows ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v17 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v18
ef:activity/change/20260820T0738569779880000/393848 properties ef:agent/normalise_property_values ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v18 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v19
ef:activity/change/20260820T0738569779880000/403040 types ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v19 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v20
ef:activity/change/20260820T0738569779880000/403041 roles ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v20 ef:flow/fe0acd60-3ddc-11dd-a045-0050c2490048/v21

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