Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'DEF 6' (grade code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=78-48-8; cc_chebi_agreed_name='Tribufos'; object_uuid=fo-f094a8ad101df245
cas_match_labels 1 consensus_match group_key=tributylphosphorotrithioate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'78-48-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f094a8ad101df245: {'78-48-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['78-48-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38737']; candidate_pubchem_cids=[5125, 135590]; selected_pubchem_cids=[5125]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
22,710 bootstrap_labels prefLabel [{"@value":"tributylphosphorotrithioate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… Bootstrapped prefLabel from legacy name field
22,711 bootstrap_labels name tributylphosphorotrithioate Purged legacy name field to enforce prefLabel usage
22,712 bootstrap_labels synonyms ["1-bis(butylsulfanyl)phosphorylsulfanylbutane","AC1L1JNY","AC1Q2XN4","AC1Q6T5V","B 1776","B-1,776","Butifos","Butiphos… [] Removed legacy synonyms field in favor of structured labels
203,452 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
203,453 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
220,535 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,190 normalize_name_case prefLabel [{"@value":"tributylphosphorotrithioate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… [{"@value":"Tributylphosphorotrithioate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
247,618 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H27OPS3… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
247,619 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
247,620 enrich_references references [] [{"@id":"beilstein:1910992","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['78-48-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38737']; candidate_pubchem_cids=[5125, 135590]; selected_pubchem_cids=[5125]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,214 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H27OPS3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H27OPS3… rdkit_pre_consensus from 'CCCCSP(=O)(SCCCC)SCCCC'; added: monoisotopic_mass
257,247 chebi_altlabels altLabel [] [{"@value":"Butifos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,781 consensus_match prefLabel [{"@value":"Tributylphosphorotrithioate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… [{"@value":"Tribufos","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consen… cas=78-48-8; cc_chebi_agreed_name='Tribufos'; object_uuid=fo-f094a8ad101df245
272,782 consensus_match altLabel [{"@value":"Butifos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"Butifos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… cas=78-48-8; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-f094a8ad101df245
272,783 consensus_match altLabel [{"@value":"Butifos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"Butifos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… group_key=tributylphosphorotrithioate||dimension=Environmental > media=Water > water_body=Ocean; cas=78-48-8; added Common Chemistry CAS names as altLabel: B 1,776, Butiphos, Butyl phosphorotrithioate ((BuS)<sub>3</sub>PO), Chemagro B 1776, DEF (defoliant), DEF 6, De-Green, Fos-Fall A, Fosfall, TBPT, TBTP, Tuoyelin; object_uuid=fo-f094a8ad101df245
272,784 consensus_match cas_match_labels {"78-48-8":"exactMatch"} group_key=tributylphosphorotrithioate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'78-48-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f094a8ad101df245: {'78-48-8': 'exactMatch'}
279,427 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H27OPS3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H27OPS3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'S,S,S-tributyl phosphorotrithioate'
286,303 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H27OPS3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H27OPS3… rdkit_post_consensus from 'CCCCSP(=O)(SCCCC)SCCCC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,655 strip_catalogue_altlabels altLabel [{"@value":"Butifos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"Butifos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Removed 1 catalogue altLabel value(s): 'DEF 6' (grade code)
382,753 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… associations resolved on the elementary layer
393,817 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H27OPS3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H27OPS3… typed the way the ontology types it
403,007 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
403,008 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/22710 prefLabel ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v0 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v1
ef:activity/change/20260820T1812399309960000/22711 name ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v1 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v2
ef:activity/change/20260820T1812399309960000/22712 synonyms ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v2 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v3
ef:activity/change/20260820T1812399309960000/203452 context ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v3 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v4
ef:activity/change/20260820T1812399309960000/203453 context_iri ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v4 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v5
ef:activity/change/20260820T1812399309960000/220535 unit_iri ef:agent/unit_normalization ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v5 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v6
ef:activity/change/20260820T1812399309960000/226190 prefLabel ef:agent/normalize_name_case ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v6 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v7
ef:activity/change/20260820T1812399309960000/247618 properties ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v7 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v8
ef:activity/change/20260820T1812399309960000/247619 skos_definition ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v8 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v9
ef:activity/change/20260820T1812399309960000/247620 references ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v9 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v10
ef:activity/change/20260820T1812399309960000/254214 properties ef:agent/rdkit_pre_consensus ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v10 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v11
ef:activity/change/20260820T1812399309960000/257247 altLabel ef:agent/chebi_altlabels ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v11 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v12
ef:activity/change/20260820T1812399309960000/272781 prefLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v12 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v13
ef:activity/change/20260820T1812399309960000/272782 altLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v13 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v14
ef:activity/change/20260820T1812399309960000/272783 altLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v14 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v15
ef:activity/change/20260820T1812399309960000/272784 cas_match_labels ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v15 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v16
ef:activity/change/20260820T1812399309960000/279427 properties ef:agent/opsin_iupac ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v16 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v17
ef:activity/change/20260820T1812399309960000/286303 properties ef:agent/rdkit_post_consensus ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v17 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v18
ef:activity/change/20260820T1812399309960000/291655 altLabel ef:agent/strip_catalogue_altlabels ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v18 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v19
ef:activity/change/20260820T1812399309960000/382753 concept_associations ef:agent/carry_associations_onto_flows ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v19 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v20
ef:activity/change/20260820T1812399309960000/393817 properties ef:agent/normalise_property_values ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v20 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v21
ef:activity/change/20260820T1812399309960000/403007 types ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v21 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v22
ef:activity/change/20260820T1812399309960000/403008 roles ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v22 ef:flow/fe0acd60-3ddc-11dd-a068-0050c2490048/v23

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