Iodinated Glycerol
Everything that changed this flow. Back to the flow
fe0acd60-3ddc-11dd-a523-0050c2490048
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 2 | chebi_altlabels, consensus_match | group_key=iodinatedglycerol||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=5634-39-9; added Common Chemistry CAS names as altLabel: 1,3-Dioxolane-4-methanol, 2-(1-iodoethyl)-, 2-(1-Iodoethyl)-1,3-dioxolane-4-methanol; object_uuid=fo-8b867c9cbcb72f4a |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=iodinatedglycerol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'5634-39-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-8b867c9cbcb72f4a: {'5634-39-9': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['5634-39-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_135062']; candidate_pubchem_cids=[21852, 101578, 23724915]; selected_pubchem_cids=[21852]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 17,874 | bootstrap_labels | prefLabel | — | [{"@value":"iodinated glycerol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… | Bootstrapped prefLabel from legacy name field |
| 17,875 | bootstrap_labels | name | iodinated glycerol | — | Purged legacy name field to enforce prefLabel usage |
| 17,876 | bootstrap_labels | synonyms | ["-","1,3-Dioxolane-4-methanol, 2-(1-iodoethyl)-","1,3-Dioxolane-4-methanol, 2-(iodoethyl)-","1,3-Dioxolene-4-methanol,… | [] | Removed legacy synonyms field in favor of structured labels |
| 205,832 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| 205,833 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-noag | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| 219,192 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 225,180 | normalize_name_case | prefLabel | [{"@value":"iodinated glycerol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… | [{"@value":"Iodinated Glycerol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 243,925 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11IO3"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 243,926 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 243,927 | enrich_references | references | [] | [{"@id":"drugcentral:1454","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['5634-39-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_135062']; candidate_pubchem_cids=[21852, 101578, 23724915]; selected_pubchem_cids=[21852]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,142 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11IO3"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11IO3"]… | rdkit_pre_consensus from 'CC(C1OCC(O1)CO)I'; added: monoisotopic_mass |
| 256,735 | chebi_altlabels | altLabel | [] | [{"@value":"glycerol iodinated","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 267,968 | consensus_match | altLabel | [{"@value":"glycerol iodinated","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | [{"@value":"glycerol iodinated","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | group_key=iodinatedglycerol||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=5634-39-9; added Common Chemistry CAS names as altLabel: 1,3-Dioxolane-4-methanol, 2-(1-iodoethyl)-, 2-(1-Iodoethyl)-1,3-dioxolane-4-methanol; object_uuid=fo-8b867c9cbcb72f4a |
| 267,969 | consensus_match | cas_match_labels | — | {"5634-39-9":"exactMatch"} | group_key=iodinatedglycerol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'5634-39-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-8b867c9cbcb72f4a: {'5634-39-9': 'exactMatch'} |
| 278,345 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11IO3"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11IO3"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1,3-Dioxolane-4-methanol, 2-(1-iodoethyl)-' |
| 285,102 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11IO3"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11IO3"]… | rdkit_post_consensus from 'CC(I)C1OCC(CO)O1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 383,951 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… | associations resolved on the elementary layer |
| 392,709 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11IO3"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11IO3"]… | typed the way the ontology types it |
| 401,310 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/17874 | prefLabel | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v0 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v1 |
| ef:activity/change/20260822T0600486828500000/17875 | name | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v1 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v2 |
| ef:activity/change/20260822T0600486828500000/17876 | synonyms | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v2 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v3 |
| ef:activity/change/20260822T0600486828500000/205832 | context | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v3 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v4 |
| ef:activity/change/20260822T0600486828500000/205833 | context_iri | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v4 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v5 |
| ef:activity/change/20260822T0600486828500000/219192 | unit_iri | ef:agent/unit_normalization | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v5 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v6 |
| ef:activity/change/20260822T0600486828500000/225180 | prefLabel | ef:agent/normalize_name_case | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v6 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v7 |
| ef:activity/change/20260822T0600486828500000/243925 | properties | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v7 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v8 |
| ef:activity/change/20260822T0600486828500000/243926 | skos_definition | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v8 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v9 |
| ef:activity/change/20260822T0600486828500000/243927 | references | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v9 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v10 |
| ef:activity/change/20260822T0600486828500000/253142 | properties | ef:agent/rdkit_pre_consensus | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v10 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v11 |
| ef:activity/change/20260822T0600486828500000/256735 | altLabel | ef:agent/chebi_altlabels | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v11 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v12 |
| ef:activity/change/20260822T0600486828500000/267968 | altLabel | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v12 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v13 |
| ef:activity/change/20260822T0600486828500000/267969 | cas_match_labels | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v13 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v14 |
| ef:activity/change/20260822T0600486828500000/278345 | properties | ef:agent/opsin_iupac | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v14 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v15 |
| ef:activity/change/20260822T0600486828500000/285102 | properties | ef:agent/rdkit_post_consensus | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v15 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v16 |
| ef:activity/change/20260822T0600486828500000/383951 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v16 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v17 |
| ef:activity/change/20260822T0600486828500000/392709 | properties | ef:agent/normalise_property_values | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v17 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v18 |
| ef:activity/change/20260822T0600486828500000/401310 | types | ef:agent/link_flows_to_their_substance | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v18 | ef:flow/fe0acd60-3ddc-11dd-a523-0050c2490048/v19 |