Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'FSR 3' (grade code), 'NSC 9659' (registry code), 'Preparation 6424' (trade name)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=isoniazid||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'54-85-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0b85e2116f0ac1ff: {'54-85-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['54-85-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_6030']; candidate_pubchem_cids=[3767, 2723946, 67268295]; selected_pubchem_cids=[3767]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
19,004 bootstrap_labels prefLabel [{"@value":"isoniazid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
19,005 bootstrap_labels name isoniazid Purged legacy name field to enforce prefLabel usage
25,323 bootstrap_labels synonyms ["(HBD) Human beta-defensin-1 & INH","4-(Hydrazinocarbonyl)pyridine","4-Pyridinecarbonylhydrazine","4-Pyridinecarboxyli… [] Removed legacy synonyms field in favor of structured labels
205,922 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
205,923 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
219,537 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,418 normalize_name_case prefLabel [{"@value":"isoniazid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Isoniazid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
244,881 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
244,882 enrich_references skos_definition [{"@value":"A carbohydrazide obtained by formal condensation between pyridine-4-carboxylic acid and hydrazine.","@langu… Merged ChEBI/PubChem definitions into skos:definition
244,883 enrich_references references [] [{"@id":"drugcentral:1497","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['54-85-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_6030']; candidate_pubchem_cids=[3767, 2723946, 67268295]; selected_pubchem_cids=[3767]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,417 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O"],… rdkit_pre_consensus from 'C1=CN=CC=C1C(=O)NN'; added: monoisotopic_mass
256,860 chebi_altlabels altLabel [] [{"@value":"4-pyridinecarbohydrazide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,100 consensus_match altLabel [{"@value":"4-pyridinecarbohydrazide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"4-pyridinecarbohydrazide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… group_key=isoniazid||dimension=Environmental > media=Air > indoor=Unknown; cas=54-85-3; added Common Chemistry CAS names as altLabel: 4-(Hydrazinocarbonyl)pyridine, 4-Pyridinecarbonylhydrazine, 4-Pyridinecarboxylic acid, hydrazide, 4-Pyridinecarboxylic hydrazide, 4-Pyridylcarbonylhydrazide, 5015 R.P., Armazid, Armazide, Atcotibine, Cedin, Cotinazin, Dianicotyl, Dinacrin, Ditubin, Eralon, Ertuban, Eutizon, FSR 3, GINK, HIA, Hidranizil, Hidrasonil, Hycozid, Hydrazid, Hyzyd, Ipcazide, Isidrina, Isobicina, Isocaldin, Isocid, Isocotin, Isokin, Isolyn, Isonex, Isoniazid SA, Isoniazide, Isonicid, Isonico, Isonicotan, Isonicotinic acid hydrazyde, Isonicotinoyl hydrazide, Isonicotinoylhydrazine, Isonidrin, Isonilex, Isonindon, Isonizide, Isotebezid, Isozide, Isozin, Isozyd, Lafepe, Laniazid, Mayambutol, MeSH ID: D007538, Mybasan, NSC 9659, Neoteben, Neoxin, Neumandin, Nevin, Niadrin, Nicetal, Nicizina, Niconyl, Nicotibina, Nicotisan, Nicozide, Nidaton, Nidrazid, Nikozid, Niplen, Nitadon, Nydrazid, Nyscozid, Pelazid, Preparation 6424, Pycazide, Pyricidin, Pyrizidin, RU-EF-Tb, Raumanon, Retozide, Rimicid, Rimifon, Rimiphone, Rimitsid, Robisellin, Sauterazid, Solonex, T.B. Razide, TB-Vis, Tebecid, Teebaconin, Tekazin, Tibinide, Tibizide, Tisin, Tisiodrazida, Tizide, Tubazid, Tubazide, Tubeco, Tubicon, Tubilysin, Tubomel, Tyvid, Unicozyde, Vazadrine, Vederon, Zidafimia, Zinadon, Zonazide, [(4-Pyridinylcarbonyl)oxy]hydrazine; object_uuid=fo-0b85e2116f0ac1ff
268,101 consensus_match cas_match_labels {"54-85-3":"exactMatch"} group_key=isoniazid||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'54-85-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0b85e2116f0ac1ff: {'54-85-3': 'exactMatch'}
278,628 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '4-pyridinecarbohydrazide'
285,406 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O"],… rdkit_post_consensus from 'NNC(=O)c1ccncc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,077 strip_catalogue_altlabels altLabel [{"@value":"4-pyridinecarbohydrazide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"4-pyridinecarbohydrazide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Removed 3 catalogue altLabel value(s): 'FSR 3' (grade code), 'NSC 9659' (registry code), 'Preparation 6424' (trade name)
383,996 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… associations resolved on the elementary layer
392,994 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O"],… typed the way the ontology types it
401,735 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/19004 prefLabel ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v0 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v1
ef:activity/change/20260822T0600486828500000/19005 name ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v1 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v2
ef:activity/change/20260822T0600486828500000/25323 synonyms ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v2 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v3
ef:activity/change/20260822T0600486828500000/205922 context ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v3 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v4
ef:activity/change/20260822T0600486828500000/205923 context_iri ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v4 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v5
ef:activity/change/20260822T0600486828500000/219537 unit_iri ef:agent/unit_normalization ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v5 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v6
ef:activity/change/20260822T0600486828500000/225418 prefLabel ef:agent/normalize_name_case ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v6 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v7
ef:activity/change/20260822T0600486828500000/244881 properties ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v7 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v8
ef:activity/change/20260822T0600486828500000/244882 skos_definition ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v8 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v9
ef:activity/change/20260822T0600486828500000/244883 references ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v9 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v10
ef:activity/change/20260822T0600486828500000/253417 properties ef:agent/rdkit_pre_consensus ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v10 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v11
ef:activity/change/20260822T0600486828500000/256860 altLabel ef:agent/chebi_altlabels ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v11 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v12
ef:activity/change/20260822T0600486828500000/268100 altLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v12 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v13
ef:activity/change/20260822T0600486828500000/268101 cas_match_labels ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v13 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v14
ef:activity/change/20260822T0600486828500000/278628 properties ef:agent/opsin_iupac ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v14 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v15
ef:activity/change/20260822T0600486828500000/285406 properties ef:agent/rdkit_post_consensus ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v15 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v16
ef:activity/change/20260822T0600486828500000/291077 altLabel ef:agent/strip_catalogue_altlabels ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v16 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v17
ef:activity/change/20260822T0600486828500000/383996 concept_associations ef:agent/carry_associations_onto_flows ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v17 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v18
ef:activity/change/20260822T0600486828500000/392994 properties ef:agent/normalise_property_values ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v18 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v19
ef:activity/change/20260822T0600486828500000/401735 types ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v19 ef:flow/fe0acd60-3ddc-11dd-a550-0050c2490048/v20

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