Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 4 link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus the substance's answer, copied onto its flow
altLabel 2 chebi_altlabels, consensus_match group_key=antimycina||dimension=Environmental > media=Air > indoor=Unknown; cas=1397-94-0; added Common Chemistry CAS names as altLabel: MeSH ID: D000968; object_uuid=fo-09e3424e5865b11c
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=antimycina||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'pubchem']; cas_sources={'1397-94-0': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-09e3424e5865b11c: {'1397-94-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['1397-94-0']; matched_chebi_ids=[]; candidate_pubchem_cids=[12550, 14957, 245869, 6420045, 16218979, 71434132]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
13,605 bootstrap_labels synonyms ["(2R,3S,6S,7R,8R)-3-[(3-formamido-2-hydroxybenzoyl)amino]-8-hexyl-2,6-dimethyl-4,9-dioxo-1,5-dioxonan-7-yl 3-methylbut… [] Removed legacy synonyms field in favor of structured labels
17,703 bootstrap_labels prefLabel [{"@value":"antimycin A","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
17,704 bootstrap_labels name antimycin A Purged legacy name field to enforce prefLabel usage
206,544 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
206,545 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
217,838 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,156 normalize_name_case prefLabel [{"@value":"antimycin A","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"Antimycin A","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
240,074 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
240,075 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=1397-94-0","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['1397-94-0']; matched_chebi_ids=[]; candidate_pubchem_cids=[12550, 14957, 245869, 6420045, 16218979, 71434132]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,234 chebi_altlabels altLabel [] [{"@value":"(2R,3S,6S,7R,8R)-3-[(3-formamido-2-hydroxybenzoyl)amino]-8-hexyl-2,6-dimethyl-4,9-dioxo-1,5-dioxonan-7-yl 3… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,927 consensus_match altLabel [{"@value":"(2R,3S,6S,7R,8R)-3-[(3-formamido-2-hydroxybenzoyl)amino]-8-hexyl-2,6-dimethyl-4,9-dioxo-1,5-dioxonan-7-yl 3… [{"@value":"(2R,3S,6S,7R,8R)-3-[(3-formamido-2-hydroxybenzoyl)amino]-8-hexyl-2,6-dimethyl-4,9-dioxo-1,5-dioxonan-7-yl 3… group_key=antimycina||dimension=Environmental > media=Air > indoor=Unknown; cas=1397-94-0; added Common Chemistry CAS names as altLabel: MeSH ID: D000968; object_uuid=fo-09e3424e5865b11c
263,928 consensus_match cas_match_labels {"1397-94-0":"exactMatch"} group_key=antimycina||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'pubchem']; cas_sources={'1397-94-0': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-09e3424e5865b11c: {'1397-94-0': 'exactMatch'}
277,245 opsin_iupac properties {} {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(2R,3S,6S,7R,8R)-3-[(3-formamido-2-hydroxybenzoyl)amino]-8-hexyl-2,6-dimethyl-4,9-dioxo-1,5-dioxonan-7-yl 3-methylbutanoate'
283,908 rdkit_post_consensus properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… rdkit_post_consensus from 'CCCCCC[C@H]1C(=O)O[C@H](C)[C@H](NC(=O)c2cccc(NC=O)c2O)C(=O)O[C@@H](C)[C@@H]1OC(=O)CC(C)C'; added: inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass; confirmed: smiles_string, inchi2d_string
384,327 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… associations resolved on the elementary layer
391,593 normalise_property_values properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… typed the way the ontology types it
399,689 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
399,690 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_25944","rdfs:label":"pesticide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow
399,691 link_flows_to_their_substance properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/17703 prefLabel ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v0 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v1
ef:activity/change/20260820T1416470405690000/17704 name ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v1 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v2
ef:activity/change/20260820T1416470405690000/13605 synonyms ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v2 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v3
ef:activity/change/20260820T1416470405690000/206544 context ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v3 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v4
ef:activity/change/20260820T1416470405690000/206545 context_iri ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v4 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v5
ef:activity/change/20260820T1416470405690000/217838 unit_iri ef:agent/unit_normalization ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v5 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v6
ef:activity/change/20260820T1416470405690000/225156 prefLabel ef:agent/normalize_name_case ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v6 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v7
ef:activity/change/20260820T1416470405690000/240074 skos_definition ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v7 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v8
ef:activity/change/20260820T1416470405690000/240075 references ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v8 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v9
ef:activity/change/20260820T1416470405690000/256234 altLabel ef:agent/chebi_altlabels ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v9 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v10
ef:activity/change/20260820T1416470405690000/263927 altLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v10 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v11
ef:activity/change/20260820T1416470405690000/263928 cas_match_labels ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v11 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v12
ef:activity/change/20260820T1416470405690000/277245 properties ef:agent/opsin_iupac ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v12 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v13
ef:activity/change/20260820T1416470405690000/283908 properties ef:agent/rdkit_post_consensus ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v13 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v14
ef:activity/change/20260820T1416470405690000/384327 concept_associations ef:agent/carry_associations_onto_flows ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v14 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v15
ef:activity/change/20260820T1416470405690000/391593 properties ef:agent/normalise_property_values ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v15 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v16
ef:activity/change/20260820T1416470405690000/399689 types ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v16 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v17
ef:activity/change/20260820T1416470405690000/399690 roles ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v17 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v18
ef:activity/change/20260820T1416470405690000/399691 properties ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v18 ef:flow/fe0acd60-3ddc-11dd-a691-0050c2490048/v19

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