Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 11 catalogue altLabel value(s): 'AGSW 1121' (grade code), 'NSC 600660' (registry code), 'NSC 600661' (registry code), 'NSC 600665' (registry code), 'NSC 603570' (registry code), 'NSC 603571' (registry code), 'NSC 603572' (registry code), 'SGC 15' (grade code), 'TMO 10' (grade code), 'TMO 30' (grade code), 'TMO 50' (grade code)
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Molybdenum
cas_match_labels 1 consensus_match group_key=molybdenum||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7439-98-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-773360d91a44c0c7: {'7439-98-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7439-98-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28685']; candidate_pubchem_cids=[23932]; selected_pubchem_cids=[23932]; formula_similarity_expected=['Mo']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
19,586 bootstrap_labels prefLabel [{"@value":"molybdenum","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
19,587 bootstrap_labels name molybdenum Purged legacy name field to enforce prefLabel usage
19,588 bootstrap_labels synonyms ["(99mo)molybdenum","42Mo","4MO","6MO","AC1L2N3E","Amperit 105.054","Amperit 106.2","CPD0-2009","KST-1A1389","MChVL","M… [] Removed legacy synonyms field in favor of structured labels
206,940 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
206,941 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
219,714 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,542 normalize_name_case prefLabel [{"@value":"molybdenum","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Molybdenum","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
245,374 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
245,375 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
245,376 enrich_references references [] [{"@id":"gmelin:16205","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['7439-98-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28685']; candidate_pubchem_cids=[23932]; selected_pubchem_cids=[23932]; formula_similarity_expected=['Mo']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,569 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… rdkit_pre_consensus from '[Mo]'; added: monoisotopic_mass
256,926 chebi_altlabels altLabel [] [{"@value":"42Mo","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
269,048 consensus_match altLabel [{"@value":"42Mo","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"42Mo","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=molybdenum||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=7439-98-7; added Common Chemistry CAS names as altLabel: 3N5, AGSW 1121, Amperit 105.054, Amperit 106.2, MChVL, MeSH ID: D008982, Metco 63, Molybdenum element, NSC 600660, NSC 600661, NSC 600665, NSC 603570, NSC 603571, NSC 603572, SGC 15, TMO 10, TMO 30, TMO 50, TMOIO, TsM1; object_uuid=fo-773360d91a44c0c7
269,049 consensus_match cas_match_labels {"7439-98-7":"exactMatch"} group_key=molybdenum||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7439-98-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-773360d91a44c0c7: {'7439-98-7': 'exactMatch'}
278,801 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Molybdenum'
285,585 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… rdkit_post_consensus from '[Mo]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,203 strip_catalogue_altlabels altLabel [{"@value":"42Mo","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"42Mo","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Removed 11 catalogue altLabel value(s): 'AGSW 1121' (grade code), 'NSC 600660' (registry code), 'NSC 600661' (registry code), 'NSC 600665' (registry code), 'NSC 603570' (registry code), 'NSC 603571' (registry code), 'NSC 603572' (registry code), 'SGC 15' (grade code), 'TMO 10' (grade code), 'TMO 30' (grade code), 'TMO 50' (grade code)
384,525 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… associations resolved on the elementary layer
393,165 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… typed the way the ontology types it
401,974 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
401,975 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Mo"],"atte… the substance's answer, copied onto its flow
403,845 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Molybdenum","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Molybdenum","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enri… element name from the flow object: Molybdenum

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/19586 prefLabel ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v0 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v1
ef:activity/change/20260820T1416470405690000/19587 name ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v1 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v2
ef:activity/change/20260820T1416470405690000/19588 synonyms ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v2 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v3
ef:activity/change/20260820T1416470405690000/206940 context ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v3 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v4
ef:activity/change/20260820T1416470405690000/206941 context_iri ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v4 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v5
ef:activity/change/20260820T1416470405690000/219714 unit_iri ef:agent/unit_normalization ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v5 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v6
ef:activity/change/20260820T1416470405690000/225542 prefLabel ef:agent/normalize_name_case ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v6 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v7
ef:activity/change/20260820T1416470405690000/245374 properties ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v7 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v8
ef:activity/change/20260820T1416470405690000/245375 skos_definition ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v8 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v9
ef:activity/change/20260820T1416470405690000/245376 references ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v9 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v10
ef:activity/change/20260820T1416470405690000/253569 properties ef:agent/rdkit_pre_consensus ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v10 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v11
ef:activity/change/20260820T1416470405690000/256926 altLabel ef:agent/chebi_altlabels ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v11 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v12
ef:activity/change/20260820T1416470405690000/269048 altLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v12 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v13
ef:activity/change/20260820T1416470405690000/269049 cas_match_labels ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v13 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v14
ef:activity/change/20260820T1416470405690000/278801 properties ef:agent/opsin_iupac ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v14 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v15
ef:activity/change/20260820T1416470405690000/285585 properties ef:agent/rdkit_post_consensus ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v15 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v16
ef:activity/change/20260820T1416470405690000/291203 altLabel ef:agent/strip_catalogue_altlabels ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v16 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v17
ef:activity/change/20260820T1416470405690000/384525 concept_associations ef:agent/carry_associations_onto_flows ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v17 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v18
ef:activity/change/20260820T1416470405690000/393165 properties ef:agent/normalise_property_values ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v18 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v19
ef:activity/change/20260820T1416470405690000/401974 types ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v19 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v20
ef:activity/change/20260820T1416470405690000/401975 properties ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v20 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v21
ef:activity/change/20260820T1416470405690000/403845 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v21 ef:flow/fe0acd60-3ddc-11dd-a75b-0050c2490048/v22

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