Consensus flow list

By field

12 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 451' (registry code)
cas_match_labels 1 consensus_match group_key=2,2,2-trifluoroethanol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'75-89-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-56959ed55b55e382: {'75-89-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['75-89-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_42330']; candidate_pubchem_cids=[6409, 243029]; selected_pubchem_cids=[6409]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

18
# Step Field From To Why
25,438 bootstrap_labels prefLabel [{"@value":"2,2,2-trifluoroethanol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Bootstrapped prefLabel from legacy name field
25,439 bootstrap_labels name 2,2,2-trifluoroethanol Purged legacy name field to enforce prefLabel usage
207,000 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
207,001 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
221,001 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
248,208 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3F3O"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
248,209 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
248,210 enrich_references references [] [{"@id":"beilstein:1733203","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['75-89-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_42330']; candidate_pubchem_cids=[6409, 243029]; selected_pubchem_cids=[6409]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,358 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3F3O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3F3O"],… rdkit_pre_consensus from 'C(C(F)(F)F)O'; added: monoisotopic_mass
257,384 chebi_altlabels altLabel [] [{"@value":"2,2,2-trifluoroethyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
259,527 consensus_match altLabel [{"@value":"2,2,2-trifluoroethyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… [{"@value":"2,2,2-trifluoroethyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… group_key=2,2,2-trifluoroethanol||dimension=Environmental > media=Air > indoor=Unknown; cas=75-89-8; added Common Chemistry CAS names as altLabel: 2,2,2-Trifluoroethan-1-ol, Ethanol, 2,2,2-trifluoro-, MeSH ID: D014270, NSC 451, β,β,β-Trifluoroethyl alcohol; object_uuid=fo-56959ed55b55e382
259,528 consensus_match cas_match_labels {"75-89-8":"exactMatch"} group_key=2,2,2-trifluoroethanol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'75-89-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-56959ed55b55e382: {'75-89-8': 'exactMatch'}
279,713 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3F3O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3F3O"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,2,2-trifluoroethanol'
286,607 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3F3O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3F3O"],… rdkit_post_consensus from 'OCC(F)(F)F'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,828 strip_catalogue_altlabels altLabel [{"@value":"2,2,2-trifluoroethyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… [{"@value":"2,2,2-trifluoroethyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… Removed 1 catalogue altLabel value(s): 'NSC 451' (registry code)
384,528 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… associations resolved on the elementary layer
394,117 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3F3O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3F3O"],… typed the way the ontology types it
403,628 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

18 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T0609040591070000/25438 prefLabel ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v0 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v1
ef:activity/change/20260821T0609040591070000/25439 name ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v1 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v2
ef:activity/change/20260821T0609040591070000/207000 context ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v2 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v3
ef:activity/change/20260821T0609040591070000/207001 context_iri ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v3 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v4
ef:activity/change/20260821T0609040591070000/221001 unit_iri ef:agent/unit_normalization ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v4 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v5
ef:activity/change/20260821T0609040591070000/248208 properties ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v5 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v6
ef:activity/change/20260821T0609040591070000/248209 skos_definition ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v6 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v7
ef:activity/change/20260821T0609040591070000/248210 references ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v7 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v8
ef:activity/change/20260821T0609040591070000/254358 properties ef:agent/rdkit_pre_consensus ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v8 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v9
ef:activity/change/20260821T0609040591070000/257384 altLabel ef:agent/chebi_altlabels ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v9 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v10
ef:activity/change/20260821T0609040591070000/259527 altLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v10 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v11
ef:activity/change/20260821T0609040591070000/259528 cas_match_labels ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v11 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v12
ef:activity/change/20260821T0609040591070000/279713 properties ef:agent/opsin_iupac ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v12 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v13
ef:activity/change/20260821T0609040591070000/286607 properties ef:agent/rdkit_post_consensus ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v13 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v14
ef:activity/change/20260821T0609040591070000/291828 altLabel ef:agent/strip_catalogue_altlabels ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v14 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v15
ef:activity/change/20260821T0609040591070000/384528 concept_associations ef:agent/carry_associations_onto_flows ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v15 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v16
ef:activity/change/20260821T0609040591070000/394117 properties ef:agent/normalise_property_values ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v16 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v17
ef:activity/change/20260821T0609040591070000/403628 types ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v17 ef:flow/fe0acd60-3ddc-11dd-a77c-0050c2490048/v18

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