Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Barium
altLabel 2 chebi_altlabels, consensus_match group_key=barium||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=7440-39-3; added Common Chemistry CAS names as altLabel: Barium element, MeSH ID: D001464; object_uuid=fo-228e2a1a69e17e84
cas_match_labels 1 consensus_match group_key=barium||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-39-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-228e2a1a69e17e84: {'7440-39-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 231-149-1 from CAS 7440-39-3
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7440-39-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_32595']; candidate_pubchem_cids=[5355457, 101220898]; selected_pubchem_cids=[5355457]; formula_similarity_expected=['Ba']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
19,599 bootstrap_labels prefLabel [{"@value":"barium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Bootstrapped prefLabel from legacy name field
19,600 bootstrap_labels name barium Purged legacy name field to enforce prefLabel usage
19,601 bootstrap_labels synonyms ["56Ba","AC1L2XJH","AC1NS7I9","BARIUM ION","Ba(0)","Ba(2+)","Ba++","Ba+2","Ba2+","Barium (II) ion","Barium and Compound… [] Removed legacy synonyms field in favor of structured labels
207,272 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
207,273 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
219,718 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,546 normalize_name_case prefLabel [{"@value":"barium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… [{"@value":"Barium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,041 ec_cross_check ec_numbers [] ["231-149-1"] Resolved from EC-inventory: 231-149-1 from CAS 7440-39-3
245,386 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
245,387 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
245,388 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.028.317","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['7440-39-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_32595']; candidate_pubchem_cids=[5355457, 101220898]; selected_pubchem_cids=[5355457]; formula_similarity_expected=['Ba']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,572 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… rdkit_pre_consensus from '[Ba]'; added: monoisotopic_mass
256,930 chebi_altlabels altLabel [] [{"@value":"Ba(0)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,009 consensus_match altLabel [{"@value":"Ba(0)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"Ba(0)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… group_key=barium||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=7440-39-3; added Common Chemistry CAS names as altLabel: Barium element, MeSH ID: D001464; object_uuid=fo-228e2a1a69e17e84
264,010 consensus_match cas_match_labels {"7440-39-3":"exactMatch"} group_key=barium||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-39-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-228e2a1a69e17e84: {'7440-39-3': 'exactMatch'}
278,805 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Barium'
285,589 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… rdkit_post_consensus from '[Ba]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
384,691 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… associations resolved on the elementary layer
393,169 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… typed the way the ontology types it
401,982 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
401,983 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba"],"atte… the substance's answer, copied onto its flow
403,849 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Barium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… [{"@value":"Barium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichme… element name from the flow object: Barium

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/19599 prefLabel ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v0 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v1
ef:activity/change/20260820T0738569779880000/19600 name ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v1 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v2
ef:activity/change/20260820T0738569779880000/19601 synonyms ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v2 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v3
ef:activity/change/20260820T0738569779880000/207272 context ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v3 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v4
ef:activity/change/20260820T0738569779880000/207273 context_iri ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v4 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v5
ef:activity/change/20260820T0738569779880000/219718 unit_iri ef:agent/unit_normalization ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v5 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v6
ef:activity/change/20260820T0738569779880000/225546 prefLabel ef:agent/normalize_name_case ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v6 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v7
ef:activity/change/20260820T0738569779880000/227041 ec_numbers ef:agent/ec_cross_check ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v7 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v8
ef:activity/change/20260820T0738569779880000/245386 properties ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v8 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v9
ef:activity/change/20260820T0738569779880000/245387 skos_definition ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v9 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v10
ef:activity/change/20260820T0738569779880000/245388 references ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v10 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v11
ef:activity/change/20260820T0738569779880000/253572 properties ef:agent/rdkit_pre_consensus ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v11 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v12
ef:activity/change/20260820T0738569779880000/256930 altLabel ef:agent/chebi_altlabels ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v12 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v13
ef:activity/change/20260820T0738569779880000/264009 altLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v13 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v14
ef:activity/change/20260820T0738569779880000/264010 cas_match_labels ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v14 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v15
ef:activity/change/20260820T0738569779880000/278805 properties ef:agent/opsin_iupac ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v15 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v16
ef:activity/change/20260820T0738569779880000/285589 properties ef:agent/rdkit_post_consensus ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v16 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v17
ef:activity/change/20260820T0738569779880000/384691 concept_associations ef:agent/carry_associations_onto_flows ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v17 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v18
ef:activity/change/20260820T0738569779880000/393169 properties ef:agent/normalise_property_values ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v18 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v19
ef:activity/change/20260820T0738569779880000/401982 types ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v19 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v20
ef:activity/change/20260820T0738569779880000/401983 properties ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v20 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v21
ef:activity/change/20260820T0738569779880000/403849 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v21 ef:flow/fe0acd60-3ddc-11dd-a802-0050c2490048/v22

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