Photomirex
Everything that changed this flow. Back to the flow
fe0acd60-3ddc-11dd-a88b-0050c2490048
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | enrich_references, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 2 | consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=photomirex||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['pubchem']; cas_sources={'39801-14-4': ['pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-588ce98bb3009db2: {'39801-14-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['39801-14-4']; matched_chebi_ids=[]; candidate_pubchem_cids=[91632, 265255, 92043646, 95858751]; selected_pubchem_cids=[91632]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
18| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 21,754 | bootstrap_labels | prefLabel | — | [{"@value":"photomirex","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Bootstrapped prefLabel from legacy name field |
| 21,755 | bootstrap_labels | name | photomirex | — | Purged legacy name field to enforce prefLabel usage |
| 21,756 | bootstrap_labels | synonyms | ["1,1a,2,2,3,3a,4,5,5,5a,5b-undecachlorooctahydro-1H-1,3,4-(methanetriyl)cyclobuta[cd]pentalene","1,2,3,4,5,5,6,7,9,10,… | [] | Removed legacy synonyms field in favor of structured labels |
| 207,538 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 207,539 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 220,306 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,010 | normalize_name_case | prefLabel | [{"@value":"photomirex","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | [{"@value":"Photomirex","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 247,013 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10HCl11"]… | Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1) |
| 247,014 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 247,015 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J22.284D","provenance":{"prov:wasGeneratedBy":"enrich_referenc… | Added references with provenance; cas_numbers=['39801-14-4']; matched_chebi_ids=[]; candidate_pubchem_cids=[91632, 265255, 92043646, 95858751]; selected_pubchem_cids=[91632]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 254,038 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10HCl11"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10HCl11"]… | rdkit_pre_consensus from 'C12C3(C4(C5(C3(C(C1(C5(C2(C4(Cl)Cl)Cl)Cl)Cl)(Cl)Cl)Cl)Cl)Cl)Cl'; added: molecular_mass, monoisotopic_mass |
| 270,727 | consensus_match | altLabel | [] | [{"@value":"1,1a,2,2,3,3a,4,5,5,5a,5b-Undecachlorooctahydro-1,3,4-metheno-1<em>H</em>-cyclobuta[<em>cd</em>]pentalene",… | group_key=photomirex||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=39801-14-4; added Common Chemistry CAS names as altLabel: 1,1a,2,2,3,3a,4,5,5,5a,5b-Undecachlorooctahydro-1,3,4-metheno-1<em>H</em>-cyclobuta[<em>cd</em>]pentalene, 1,3,4-Metheno-1<em>H</em>-cyclobuta[<em>cd</em>]pentalene, 1,1a,2,2,3,3a,4,5,5,5a,5b-undecachlorooctahydro-, 8-Hydromirex, 8-Monohydromirex; object_uuid=fo-588ce98bb3009db2 |
| 270,728 | consensus_match | cas_match_labels | — | {"39801-14-4":"exactMatch"} | group_key=photomirex||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['pubchem']; cas_sources={'39801-14-4': ['pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-588ce98bb3009db2: {'39801-14-4': 'exactMatch'} |
| 286,100 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10HCl11"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10HCl11"]… | rdkit_post_consensus from 'C12C3(C4(C5(C3(C(C1(C5(C2(C4(Cl)Cl)Cl)Cl)Cl)(Cl)Cl)Cl)Cl)Cl)Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 293,139 | dedupe_altlabels | altLabel | [{"@value":"1,1a,2,2,3,3a,4,5,5,5a,5b-Undecachlorooctahydro-1,3,4-metheno-1<em>H</em>-cyclobuta[<em>cd</em>]pentalene",… | [{"@value":"1,1a,2,2,3,3a,4,5,5,5a,5b-Undecachlorooctahydro-1,3,4-metheno-1H-cyclobuta[cd]pentalene","@language":"en","… | Deduplicated altLabel values and removed entries matching prefLabel |
| 384,804 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… | associations resolved on the elementary layer |
| 393,628 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10HCl11"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10HCl11"]… | typed the way the ontology types it |
| 402,723 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
18 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/21754 | prefLabel | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v0 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v1 |
| ef:activity/change/20260821T1554374006150000/21755 | name | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v1 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v2 |
| ef:activity/change/20260821T1554374006150000/21756 | synonyms | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v2 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v3 |
| ef:activity/change/20260821T1554374006150000/207538 | context | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v3 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v4 |
| ef:activity/change/20260821T1554374006150000/207539 | context_iri | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v4 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v5 |
| ef:activity/change/20260821T1554374006150000/220306 | unit_iri | ef:agent/unit_normalization | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v5 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v6 |
| ef:activity/change/20260821T1554374006150000/226010 | prefLabel | ef:agent/normalize_name_case | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v6 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v7 |
| ef:activity/change/20260821T1554374006150000/247013 | properties | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v7 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v8 |
| ef:activity/change/20260821T1554374006150000/247014 | skos_definition | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v8 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v9 |
| ef:activity/change/20260821T1554374006150000/247015 | references | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v9 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v10 |
| ef:activity/change/20260821T1554374006150000/254038 | properties | ef:agent/rdkit_pre_consensus | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v10 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v11 |
| ef:activity/change/20260821T1554374006150000/270727 | altLabel | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v11 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v12 |
| ef:activity/change/20260821T1554374006150000/270728 | cas_match_labels | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v12 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v13 |
| ef:activity/change/20260821T1554374006150000/286100 | properties | ef:agent/rdkit_post_consensus | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v13 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v14 |
| ef:activity/change/20260821T1554374006150000/293139 | altLabel | ef:agent/dedupe_altlabels | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v14 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v15 |
| ef:activity/change/20260821T1554374006150000/384804 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v15 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v16 |
| ef:activity/change/20260821T1554374006150000/393628 | properties | ef:agent/normalise_property_values | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v16 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v17 |
| ef:activity/change/20260821T1554374006150000/402723 | types | ef:agent/link_flows_to_their_substance | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v17 | ef:flow/fe0acd60-3ddc-11dd-a88b-0050c2490048/v18 |