Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 39084' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=azathioprine||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'446-86-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b5d59f8b71496f47: {'446-86-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['446-86-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2948']; candidate_pubchem_cids=[2265, 45073553, 131674237]; selected_pubchem_cids=[2265]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
7,732 bootstrap_labels prefLabel [{"@value":"azathioprine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
7,733 bootstrap_labels name azathioprine Purged legacy name field to enforce prefLabel usage
7,734 bootstrap_labels synonyms ["1H-Purine, 6-((1-methyl-4-nitro-1H-imidazol-5-yl)thio)-","1H-Purine, 6-[(1-methyl-4-nitro-1H-imidazol-5-yl)thio]-","6… [] Removed legacy synonyms field in favor of structured labels
210,450 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
210,451 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
215,919 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,906 normalize_name_case prefLabel [{"@value":"azathioprine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Azathioprine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
234,579 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H7N7O2S"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,580 enrich_references skos_definition [{"@value":"A thiopurine that is 6-mercaptopurine in which the mercapto hydrogen is replaced by a 1-methyl-4-nitroimida… Merged ChEBI/PubChem definitions into skos:definition
234,581 enrich_references references [] [{"@id":"drugcentral:269","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['446-86-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2948']; candidate_pubchem_cids=[2265, 45073553, 131674237]; selected_pubchem_cids=[2265]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,438 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H7N7O2S"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H7N7O2S"… rdkit_pre_consensus from 'CN1C=NC(=C1SC2=NC=NC3=C2NC=N3)[N+](=O)[O-]'; added: monoisotopic_mass
255,426 chebi_altlabels altLabel [] [{"@value":"6-((1-Methyl-4-nitro-1H-imidazol-5-yl)thio)-1H-purine","@language":"en","source":{"prov:wasGeneratedBy":"ch… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,970 consensus_match altLabel [{"@value":"6-((1-Methyl-4-nitro-1H-imidazol-5-yl)thio)-1H-purine","@language":"en","source":{"prov:wasGeneratedBy":"ch… [{"@value":"6-((1-Methyl-4-nitro-1H-imidazol-5-yl)thio)-1H-purine","@language":"en","source":{"prov:wasGeneratedBy":"ch… group_key=azathioprine||dimension=Environmental > media=Water > water_body=Long-term; cas=446-86-6; added Common Chemistry CAS names as altLabel: 1<em>H</em>-Purine, 6-[(1-methyl-4-nitro-1<em>H</em>-imidazol-5-yl)thio]-, 6-(1-Methyl-4-nitroimidazol-5-yl)thiopurine, 6-(1-Methyl-4-nitromidazol-5-ylthio)purine, 6-[(1-Methyl-4-nitro-1<em>H</em>-imidazol-5-yl)thio]-9<em>H</em>-purine, 9<em>H</em>-Purine, 6-[(1-methyl-4-nitro-1<em>H</em>-imidazol-5-yl)thio]-, Azafor, Azamune, Azanin, Azasan, Azathioprin, Azathropine, Azoran, Azothioprine, BW 57-322, Imuran, Imurek, Imurel, MeSH ID: D001379, Muran, NSC 39084, Purine, 6-[(1-methyl-4-nitroimidazol-5-yl)thio]-; object_uuid=fo-b5d59f8b71496f47
263,971 consensus_match cas_match_labels {"446-86-6":"exactMatch"} group_key=azathioprine||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'446-86-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b5d59f8b71496f47: {'446-86-6': 'exactMatch'}
275,606 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H7N7O2S"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H7N7O2S"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '6-((1-Methyl-4-nitro-1H-imidazol-5-yl)thio)-1H-purine'
282,140 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H7N7O2S"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H7N7O2S"… rdkit_post_consensus from 'Cn1cnc([N+](=O)[O-])c1Sc1[nH]cnc2ncnc1-2'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,847 strip_catalogue_altlabels altLabel [{"@value":"6-((1-Methyl-4-nitro-1H-imidazol-5-yl)thio)-1H-purine","@language":"en","source":{"prov:wasGeneratedBy":"ch… [{"@value":"6-((1-Methyl-4-nitro-1H-imidazol-5-yl)thio)-1H-purine","@language":"en","source":{"prov:wasGeneratedBy":"ch… Removed 1 catalogue altLabel value(s): 'NSC 39084' (registry code)
386,267 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… associations resolved on the elementary layer
389,928 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H7N7O2S"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H7N7O2S"… typed the way the ontology types it
397,323 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/7732 prefLabel ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v0 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v1
ef:activity/change/20260821T1554374006150000/7733 name ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v1 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v2
ef:activity/change/20260821T1554374006150000/7734 synonyms ef:agent/bootstrap_labels ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v2 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v3
ef:activity/change/20260821T1554374006150000/210450 context ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v3 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v4
ef:activity/change/20260821T1554374006150000/210451 context_iri ef:agent/default_context_mapping ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v4 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v5
ef:activity/change/20260821T1554374006150000/215919 unit_iri ef:agent/unit_normalization ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v5 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v6
ef:activity/change/20260821T1554374006150000/222906 prefLabel ef:agent/normalize_name_case ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v6 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v7
ef:activity/change/20260821T1554374006150000/234579 properties ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v7 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v8
ef:activity/change/20260821T1554374006150000/234580 skos_definition ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v8 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v9
ef:activity/change/20260821T1554374006150000/234581 references ef:agent/enrich_references ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v9 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v10
ef:activity/change/20260821T1554374006150000/250438 properties ef:agent/rdkit_pre_consensus ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v10 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v11
ef:activity/change/20260821T1554374006150000/255426 altLabel ef:agent/chebi_altlabels ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v11 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v12
ef:activity/change/20260821T1554374006150000/263970 altLabel ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v12 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v13
ef:activity/change/20260821T1554374006150000/263971 cas_match_labels ef:agent/consensus_match ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v13 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v14
ef:activity/change/20260821T1554374006150000/275606 properties ef:agent/opsin_iupac ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v14 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v15
ef:activity/change/20260821T1554374006150000/282140 properties ef:agent/rdkit_post_consensus ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v15 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v16
ef:activity/change/20260821T1554374006150000/288847 altLabel ef:agent/strip_catalogue_altlabels ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v16 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v17
ef:activity/change/20260821T1554374006150000/386267 concept_associations ef:agent/carry_associations_onto_flows ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v17 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v18
ef:activity/change/20260821T1554374006150000/389928 properties ef:agent/normalise_property_values ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v18 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v19
ef:activity/change/20260821T1554374006150000/397323 types ef:agent/link_flows_to_their_substance ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v19 ef:flow/fe0acd60-3ddc-11dd-ae6d-0050c2490048/v20

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