Crystal violet
Everything that changed this flow. Back to the flow
fe0acd60-3ddc-11dd-aedc-0050c2490048
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 4 catalogue altLabel value(s): 'Basonyl Violet 610' (trade name), 'C.I. 42555' (registry code), 'CI 42555' (registry code), 'Violet 612' (trade name) |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=548-62-9; cc_chebi_agreed_name='Crystal violet'; object_uuid=fo-2113ea534f0b76c1 |
| cas_match_labels | 1 | consensus_match | group_key=c.i.basicviolet3||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'548-62-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-2113ea534f0b76c1: {'548-62-9': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['548-62-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_41688']; candidate_pubchem_cids=[3468, 11057, 23424024, 57383923, 129893623]; selected_pubchem_cids=[11057]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 8,366 | bootstrap_labels | prefLabel | — | [{"@value":"C.I. Basic Violet 3","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… | Bootstrapped prefLabel from legacy name field |
| 8,367 | bootstrap_labels | name | C.I. Basic Violet 3 | — | Purged legacy name field to enforce prefLabel usage |
| 8,368 | bootstrap_labels | synonyms | ["((4-bis(p-(dimethylamino)phenyl)methylene)-2,5-cyclohexadien-1-ylidene)dimethylammonium chloride","(4-(4,4'-Bis(dimet… | [] | Removed legacy synonyms field in favor of structured labels |
| 210,658 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 210,659 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 216,124 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 235,172 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30ClN3… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 235,173 | enrich_references | skos_definition | — | [{"@value":"An organic chloride salt that is the monochloride salt of crystal violet cation. It has been used in creams… | Merged ChEBI/PubChem definitions into skos:definition |
| 235,174 | enrich_references | references | [] | [{"@id":"https://chem.echa.europa.eu/100.008.140","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… | Added references with provenance; cas_numbers=['548-62-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_41688']; candidate_pubchem_cids=[3468, 11057, 23424024, 57383923, 129893623]; selected_pubchem_cids=[11057]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,611 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30ClN3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30ClN3… | rdkit_pre_consensus from 'CN(C)C1=CC=C(C=C1)C(=C2C=CC(=[N+](C)C)C=C2)C3=CC=C(C=C3)N(C)C.[Cl-]'; added: monoisotopic_mass |
| 255,546 | chebi_altlabels | altLabel | [] | [{"@value":"(4-{bis[-(dimethylamino)phenyl]methylene}-2,5-cyclohexadien-1-ylidene)dimethylammonium chloride","@language… | Added 35 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 264,665 | consensus_match | prefLabel | [{"@value":"C.I. Basic Violet 3","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… | [{"@value":"Crystal violet","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"… | cas=548-62-9; cc_chebi_agreed_name='Crystal violet'; object_uuid=fo-2113ea534f0b76c1 |
| 264,666 | consensus_match | altLabel | [{"@value":"(4-{bis[-(dimethylamino)phenyl]methylene}-2,5-cyclohexadien-1-ylidene)dimethylammonium chloride","@language… | [{"@value":"(4-{bis[-(dimethylamino)phenyl]methylene}-2,5-cyclohexadien-1-ylidene)dimethylammonium chloride","@language… | cas=548-62-9; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-2113ea534f0b76c1 |
| 264,669 | consensus_match | altLabel | [{"@value":"(4-{bis[-(dimethylamino)phenyl]methylene}-2,5-cyclohexadien-1-ylidene)dimethylammonium chloride","@language… | [{"@value":"(4-{bis[-(dimethylamino)phenyl]methylene}-2,5-cyclohexadien-1-ylidene)dimethylammonium chloride","@language… | group_key=c.i.basicviolet3||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=548-62-9; added Common Chemistry CAS names as altLabel: 12416 Violet, Aizen Crystal Violet, Aizen Crystal Violet Extra Pure, Aizen Crystal Violet Powder, Aniline violet pyoktanine, Basonyl Violet 610, Chlorohexamethylene-<em>p</em>-fuchsin, Crystal Violet 10B, Crystal Violet 5BO, Crystal Violet 6B, Crystal Violet 6BO, Crystal Violet AO, Crystal Violet AON, Crystal Violet BP, Crystal Violet BPC, Crystal Violet Extra Pure, Crystal Violet Extra Pure APN, Crystal Violet Extra Pure APNX, Crystal Violet FN, Crystal Violet HL 2, Crystal Violet O, Crystal Violet Pure DSC, Crystal Violet Pure DSC Brilliant, Crystal Violet SS, Crystal Violet Technical, Crystal Violet USP, Crystal Violet chloride, Gentersal, Gentian Violet B, Genticid, Gentioletten, Hecto Violet R, Hectograph Violet SR, Hexamethyl violet, Hidaco Brilliant Crystal Violet, Keyazine Crystal Violet 6B, Meroxyl-Wander, Meroxylan-Wander, Methanaminium, <em>N</em>-[4-[bis[4-(dimethylamino)phenyl]methylene]-2,5-cyclohexadien-1-ylidene]-<em>N</em>-methyl-, chloride, Methanaminium, <em>N</em>-[4-[bis[4-(dimethylamino)phenyl]methylene]-2,5-cyclohexadien-1-ylidene]-<em>N</em>-methyl-, chloride (1:1), Methyl Violet 10B, Methyl Violet 10BD, Methyl Violet 10BK, Methyl Violet 10BN, Methyl Violet 10BNS, Methyl Violet 10BO, Methyl Violet 5BNO, Methyl Violet 5BO, Methyl Violet 6B, Methyl Violet 6B (biological stain), Mitsui Crystal Violet, Oxiuran, Oxycolor, Oxyozyl, Paper Blue R, Pararosaniline, <em>N</em>,<em>N</em>,<em>N</em>′,<em>N</em>′,<em>N</em>′′,<em>N</em>′′-hexamethyl-, chloride, Plastoresin Violet 5BO, Sanyo Fanal Violet R, Vermicid, Violet 5BO, Violet 612, Violet 6BN, Violet CP, Violet XXIII; object_uuid=fo-2113ea534f0b76c1 |
| 264,671 | consensus_match | cas_match_labels | — | {"548-62-9":"exactMatch"} | group_key=c.i.basicviolet3||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'548-62-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-2113ea534f0b76c1: {'548-62-9': 'exactMatch'} |
| 275,779 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30ClN3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30ClN3… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '4-{bis[4-(dimethylamino)phenyl]methylene}-N,N-dimethylcyclohexa-2,5-dien-1-iminium chloride' |
| 282,336 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30ClN3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30ClN3… | rdkit_post_consensus from 'CN(C)c1ccc(C(=C2C=CC(=[N+](C)C)C=C2)c2ccc(N(C)C)cc2)cc1.[Cl-]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,974 | strip_catalogue_altlabels | altLabel | [{"@value":"(4-{bis[-(dimethylamino)phenyl]methylene}-2,5-cyclohexadien-1-ylidene)dimethylammonium chloride","@language… | [{"@value":"(4-{bis[-(dimethylamino)phenyl]methylene}-2,5-cyclohexadien-1-ylidene)dimethylammonium chloride","@language… | Removed 4 catalogue altLabel value(s): 'Basonyl Violet 610' (trade name), 'C.I. 42555' (registry code), 'CI 42555' (registry code), 'Violet 612' (trade name) |
| 386,371 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/fe0acd60-3ddc-… | associations resolved on the elementary layer |
| 390,119 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30ClN3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30ClN3… | typed the way the ontology types it |
| 397,601 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/ChemicalSalt"] | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/8366 | prefLabel | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v0 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v1 |
| ef:activity/change/20260822T0600486828500000/8367 | name | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v1 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v2 |
| ef:activity/change/20260822T0600486828500000/8368 | synonyms | ef:agent/bootstrap_labels | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v2 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v3 |
| ef:activity/change/20260822T0600486828500000/210658 | context | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v3 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v4 |
| ef:activity/change/20260822T0600486828500000/210659 | context_iri | ef:agent/default_context_mapping | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v4 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v5 |
| ef:activity/change/20260822T0600486828500000/216124 | unit_iri | ef:agent/unit_normalization | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v5 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v6 |
| ef:activity/change/20260822T0600486828500000/235172 | properties | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v6 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v7 |
| ef:activity/change/20260822T0600486828500000/235173 | skos_definition | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v7 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v8 |
| ef:activity/change/20260822T0600486828500000/235174 | references | ef:agent/enrich_references | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v8 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v9 |
| ef:activity/change/20260822T0600486828500000/250611 | properties | ef:agent/rdkit_pre_consensus | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v9 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v10 |
| ef:activity/change/20260822T0600486828500000/255546 | altLabel | ef:agent/chebi_altlabels | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v10 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v11 |
| ef:activity/change/20260822T0600486828500000/264665 | prefLabel | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v11 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v12 |
| ef:activity/change/20260822T0600486828500000/264666 | altLabel | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v12 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v13 |
| ef:activity/change/20260822T0600486828500000/264669 | altLabel | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v13 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v14 |
| ef:activity/change/20260822T0600486828500000/264671 | cas_match_labels | ef:agent/consensus_match | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v14 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v15 |
| ef:activity/change/20260822T0600486828500000/275779 | properties | ef:agent/opsin_iupac | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v15 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v16 |
| ef:activity/change/20260822T0600486828500000/282336 | properties | ef:agent/rdkit_post_consensus | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v16 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v17 |
| ef:activity/change/20260822T0600486828500000/288974 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v17 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v18 |
| ef:activity/change/20260822T0600486828500000/386371 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v18 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v19 |
| ef:activity/change/20260822T0600486828500000/390119 | properties | ef:agent/normalise_property_values | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v19 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v20 |
| ef:activity/change/20260822T0600486828500000/397601 | types | ef:agent/link_flows_to_their_substance | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v20 | ef:flow/fe0acd60-3ddc-11dd-aedc-0050c2490048/v21 |