Water
Everything that changed this flow. Back to the flow
419682fe-60fb-4b43-be89-bf2824b51104
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'NSC 147337' (registry code), 'R 718' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=water||dimension=Resource > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7732-18-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-464532a8f956fd39: {'7732-18-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Resources > Resources from water > Renewable material resources from water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Resources > Resources from water > Renewable material resources from water |
| ec_numbers | 1 | ec_cross_check | Resolved from EC-inventory: 231-791-2 from CAS 7732-18-5 |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['7732-18-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15377']; candidate_pubchem_cids=[962, 14798, 5460604, 10214376, 22247451]; selected_pubchem_cids=[962]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'm3' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 22,037 | bootstrap_labels | prefLabel | — | [{"@value":"water","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… | Bootstrapped prefLabel from legacy name field |
| 22,038 | bootstrap_labels | name | water | — | Purged legacy name field to enforce prefLabel usage |
| 22,039 | bootstrap_labels | synonyms | ["3H-Water","8O","AB1004056","AC1L1AF5","AC1L4MKB","AC1Q55HR","AC1Q55HS","AC1Q55HT","AC1Q55HU","Aqua Purificata","BOUND… | [] | Removed legacy synonyms field in favor of structured labels |
| 80,448 | default_context_mapping | context | — | {"dimension":"Resource","media":"Water","water_body":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Resources > Resources from water > Renewable material resources from water |
| 80,449 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/reso-wate | Mapped from context mapping for source=EF 3.1, source context Resources > Resources from water > Renewable material resources from water |
| 220,386 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/M3 | Unit IRI set from normalization of 'm3' |
| 226,074 | normalize_name_case | prefLabel | [{"@value":"water","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… | [{"@value":"Water","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 227,072 | ec_cross_check | ec_numbers | [] | ["231-791-2"] | Resolved from EC-inventory: 231-791-2 from CAS 7732-18-5 |
| 247,229 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O"],"att… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1, commonchemistry_cas=['7732-18-5']) |
| 247,230 | enrich_references | skos_definition | — | [{"@value":"An oxygen hydride consisting of an oxygen atom that is covalently bonded to two hydrogen atoms","@language"… | Merged ChEBI/PubChem definitions into skos:definition |
| 247,231 | enrich_references | references | [] | [{"@id":"gmelin:117","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consen… | Added references with provenance; cas_numbers=['7732-18-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15377']; candidate_pubchem_cids=[962, 14798, 5460604, 10214376, 22247451]; selected_pubchem_cids=[962]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 254,106 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O"],"att… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O"],"att… | rdkit_pre_consensus from 'O'; added: monoisotopic_mass |
| 257,176 | chebi_altlabels | altLabel | [] | [{"@value":"((1)H2)water","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | Added 16 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s) |
| 273,281 | consensus_match | altLabel | [{"@value":"((1)H2)water","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | [{"@value":"((1)H2)water","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | group_key=water||dimension=Resource > media=Water > water_body=Unknown; cas=7732-18-5; added Common Chemistry CAS names as altLabel: Aquafina, Distilled water, Hydrogen oxide (H<sub>2</sub>O), MeSH ID: D014867, Milli-Q water, NSC 147337, R 718, Ultrex II Ultrapure; object_uuid=fo-464532a8f956fd39 |
| 273,282 | consensus_match | cas_match_labels | — | {"7732-18-5":"exactMatch"} | group_key=water||dimension=Resource > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7732-18-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-464532a8f956fd39: {'7732-18-5': 'exactMatch'} |
| 279,321 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O"],"att… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O"],"att… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Water' |
| 286,192 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O"],"att… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O"],"att… | rdkit_post_consensus from 'O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,583 | strip_catalogue_altlabels | altLabel | [{"@value":"((1)H2)water","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | [{"@value":"((1)H2)water","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | Removed 2 catalogue altLabel value(s): 'NSC 147337' (registry code), 'R 718' (grade code) |
| 321,257 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/419682fe-60fb-… | associations resolved on the elementary layer |
| 393,716 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O"],"att… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O"],"att… | typed the way the ontology types it |
| 402,852 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule","http://purl.obolibrary.org/obo/ENVO_00002006"] | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/22037 | prefLabel | ef:agent/bootstrap_labels | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v0 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v1 |
| ef:activity/change/20260820T0738569779880000/22038 | name | ef:agent/bootstrap_labels | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v1 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v2 |
| ef:activity/change/20260820T0738569779880000/22039 | synonyms | ef:agent/bootstrap_labels | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v2 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v3 |
| ef:activity/change/20260820T0738569779880000/80448 | context | ef:agent/default_context_mapping | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v3 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v4 |
| ef:activity/change/20260820T0738569779880000/80449 | context_iri | ef:agent/default_context_mapping | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v4 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v5 |
| ef:activity/change/20260820T0738569779880000/220386 | unit_iri | ef:agent/unit_normalization | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v5 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v6 |
| ef:activity/change/20260820T0738569779880000/226074 | prefLabel | ef:agent/normalize_name_case | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v6 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v7 |
| ef:activity/change/20260820T0738569779880000/227072 | ec_numbers | ef:agent/ec_cross_check | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v7 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v8 |
| ef:activity/change/20260820T0738569779880000/247229 | properties | ef:agent/enrich_references | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v8 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v9 |
| ef:activity/change/20260820T0738569779880000/247230 | skos_definition | ef:agent/enrich_references | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v9 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v10 |
| ef:activity/change/20260820T0738569779880000/247231 | references | ef:agent/enrich_references | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v10 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v11 |
| ef:activity/change/20260820T0738569779880000/254106 | properties | ef:agent/rdkit_pre_consensus | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v11 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v12 |
| ef:activity/change/20260820T0738569779880000/257176 | altLabel | ef:agent/chebi_altlabels | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v12 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v13 |
| ef:activity/change/20260820T0738569779880000/273281 | altLabel | ef:agent/consensus_match | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v13 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v14 |
| ef:activity/change/20260820T0738569779880000/273282 | cas_match_labels | ef:agent/consensus_match | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v14 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v15 |
| ef:activity/change/20260820T0738569779880000/279321 | properties | ef:agent/opsin_iupac | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v15 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v16 |
| ef:activity/change/20260820T0738569779880000/286192 | properties | ef:agent/rdkit_post_consensus | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v16 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v17 |
| ef:activity/change/20260820T0738569779880000/291583 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v17 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v18 |
| ef:activity/change/20260820T0738569779880000/321257 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v18 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v19 |
| ef:activity/change/20260820T0738569779880000/393716 | properties | ef:agent/normalise_property_values | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v19 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v20 |
| ef:activity/change/20260820T0738569779880000/402852 | types | ef:agent/link_flows_to_their_substance | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v20 | ef:flow/419682fe-60fb-4b43-be89-bf2824b51104/v21 |